BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019A02SP1|AL427408
(879 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1485 1457 0.0
>3x_Contig1485
Length = 9830
Score = 1457 bits (715), Expect = 0.0
Identities = 821/880 (93%), Gaps = 1/880 (0%)
Strand = Plus / Minus
Query: 1 aggacgtccccgawtcatcaccgaggattactcgtgactcggtattgtgactatcaaagg 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 985 aggacgtccccgaatcatcaccgaggattactcgtgactcggtattgtgactatcaaagg 926
Query: 61 gtccaggagatagattgamggaagttgagattaatcaagggggtcttggtacagagatgt 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 925 gtccaggagatagattgaaggaagttgagattaatcaagggggtcttggtacagagatgt 866
Query: 121 ggtatctgcygcyctgcccttgccgaaagayattgcaccctatcttagatagtcaatttt 180
||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 865 ggtatctgctgctctgcccttgccgaaagatattgcaccctatcttagatagtcaatttt 806
Query: 181 ttgggcttatcacaccgaatgg-ggtaaaayataacggttaaatgatattatanntnktk 239
|||||||||||||||||||||| ||||||| |||||||||||||||||||||| | |
Sbjct: 805 ttgggcttatcacaccgaatggtggtaaaatataacggttaaatgatattataaatagtg 746
Query: 240 ttatgttcgcgtctgtccgcctatataaccatcaagcgaccygacgatctttgataaaag 299
|||||| ||||||||| ||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 745 ttatgtacgcgtctgtgcgcttatataaccatcaagcgacctgacgatctttgataaaag 686
Query: 300 acaaaggacacaggacaatgagtgtcgcgtacgtccytcatgtctycytgttcagtycat 359
|||||||||||||||||||||||||||||||||| | | |||||| | |||||||| |||
Sbjct: 685 acaaaggacacaggacaatgagtgtcgcgtacgtgctttatgtcttcttgttcagttcat 626
Query: 360 cgaactggtagccccyagcyacacccgcmgtacccccytccacagtagcmccgtcytcyt 419
|||||||||||| || ||| |||||||| |||||| | ||||||||||| ||||| || |
Sbjct: 625 cgaactggtagctcctagctacacccgcagtaccctcttccacagtagcaccgtcttctt 566
Query: 420 cyccgtcttcgtcatcyttgtagtcacttccyagaccygtccaatgtcgggtttgcmaga 479
| |||||||||||||| |||||||||||||| ||||| |||||||||||||||||| |||
Sbjct: 565 ctccgtcttcgtcatctttgtagtcacttcctagacctgtccaatgtcgggtttgcaaga 506
Query: 480 atgccgccgatgtagagacggtgttcctgacagcsactgtctgccagaacygtttcacca 539
|||| ||||||||||||||||||||||||| ||| ||||||||| ||||| |||||||||
Sbjct: 505 atgctgccgatgtagagacggtgttcctgatagcgactgtctgcgagaactgtttcacca 446
Query: 540 gtccygtggaatcagaggctcgcacctcycccaccggagtctcaatttcaagtcttgcya 599
|| | ||||||||||||||||| || || | || ||||| ||||||||||||||||| |
Sbjct: 445 gttctgtggaatcagaggctcgtacttcttctactggagtttcaatttcaagtcttgcta 386
Query: 600 tttgacgtaatggtcttgaggtagaaacgtatttycctgtgactgcmttaaattccggtg 659
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 385 tttgacgtaatggtcttgaggtagaaacgtattttcctgtgactgcattaaattccggtg 326
Query: 660 cctcatcctcatcgcttctacattccgtacctgaggacagtrtatcttgttccatgtsat 719
| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 325 cttcatcttcatcgcttctacattccgtacctgaggacagtatatcttgttccatgtcat 266
Query: 720 cgctgtsattaacctcgttttctatctggttgataatggatttaaagtccgtgatccatt 779
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cgctgtcattaacctcgttttctatctggttgataatggatttaaagtccgtgatccatt 206
Query: 780 gcccagtccatgtgacttcgtcactcaatgccatgagaagctcatatggtgtratgatcg 839
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 205 gcccagtccatgtgacttcgtcactcaatgccatgagaagctcatatggtgtaatgatcg 146
Query: 840 gcttgtagaactcgttatactggtctagaacgatacctcc 879
||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 gcttgtagaactcgttatactggtctagaacgatacctcc 106
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.717 1.34
Gapped
Lambda K H
1.41 0.717 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2711
Number of Sequences: 1807
Number of extensions: 2711
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 879
length of database: 10,358,551
effective HSP length: 16
effective length of query: 863
effective length of database: 10,329,639
effective search space: 8914478457
effective search space used: 8914478457
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.5 bits)
S1: 12 (24.9 bits)
S2: 49 (100.3 bits)